BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007E01SP1|AL425699
(579 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1624 1074 0.0
>3x_Contig1624
Length = 12551
Score = 1074 bits (535), Expect = 0.0
Identities = 563/577 (97%), Gaps = 1/577 (0%)
Strand = Plus / Minus
Query: 4 aatgaacagggtcggctgggttatggtccctggtagtgaggagataactccggtgctcac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1220 aatgaacagggtcggctgggttatggtccctggtagtgaggagataactccggtgctcac 1161
Query: 64 cgcttttktcgggggtgttttcaccctgaaacaccatcgtggccgtggatatgccaagaa 123
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1160 cgcttgtgtcgggggtgttttcaccctgaaacaccatcgtggccgtggatatgccaagaa 1101
Query: 124 aatkattgatcagttawaccatatgtacgattctttatcagaatcaagcgatgatccytt 183
||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1100 aatgattgatcagttaaaccatatgtacgattctttatcagaatcaagcgatgatccgtt 1041
Query: 184 cttgaagtatatkactattgatctttacagtgaagtagatgagtactattccagaaacgg 243
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 cttgaagtatatgactattgatctttacagtgaagtagatgagtactattccagaaacgg 981
Query: 244 tttcgtgtcttaccatgttccagtatacgagatccatcaattkgctgctttggaaaccaa 303
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 980 tttcgtgtcttaccatgttccagtatacgagatccatcaattggctgctttggaaaccag 921
Query: 304 atactgtkatgccttgggccaagctaatwaktcacctgttagaacgctagggtataacga 363
||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 920 atactgtgatgccttgggccaagctaataagtcacctgttagaacgctagggtataacga 861
Query: 364 ttattaagaccttgttgaattgcwaaggcagcaatttaggaaacagatggttgagtataa 423
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 860 ttatgaagaccttgttgaattgcaaaggcagcaatttaggaaacagatggttgagtataa 801
Query: 424 tgacgggtccaagttccttttcacagtg-aacccacgttggaaacatacatgtggttcga 482
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 800 tgacgggtccaagttccttttcacagtgaaacccacgttggaaacatacatgtggttcga 741
Query: 483 ggaccgtgatatcttcgtttcgaagaaattccacgaggaaaaacctatcagattcggtgc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ggaccgtgatatcttcgtttcgaagaaattccacgaggaaaaacctatcagattcggtgc 681
Query: 543 tgcattatctgatggttctcatatcgtatggcatcac 579
|||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgcattatctgatggttctcatatcgtatggcatcac 644
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2993
Number of Sequences: 1807
Number of extensions: 2993
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 579
length of database: 10,358,551
effective HSP length: 16
effective length of query: 563
effective length of database: 10,329,639
effective search space: 5815586757
effective search space used: 5815586757
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)